BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033B12SP1|AL429699
(917 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1741 1793 0.0
>3x_Contig1741
Length = 21706
Score = 1793 bits (904), Expect = 0.0
Identities = 915/918 (99%), Gaps = 1/918 (0%)
Strand = Plus / Minus
Query: 1 gctattagaggttcaaagtgaa-catgaaacaacggatcgctgagaacttgggaaatggc 59
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1844 gctattagaggttcaaagtgaaacatgaaacaacggatcgctgagaacttgggaaatggc 1785
Query: 60 gagcgatccgatcatggggcgatgcgttaatatgcgagcgatacttctataattatatgc 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1784 gagcgatccgatcatggggcgatgcgttaatatgcgagcgatacttctataattatatgc 1725
Query: 120 gagcacatccatgtgtatatatatatatatacaacgagtgcgtattgaacttgtttcagt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1724 gagcacatccatgtgtatatatatatatatacaacgagtgcgtattgaacttgtttcagt 1665
Query: 180 attgttttagtaggaactgtctgtatcaagcgatgggcaccagagaccatctcgagtaga 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1664 attgttttagtaggaactgtctgtatcaagcgatgggcaccagagaccatctcgagtaga 1605
Query: 240 agttgcacgcataaagtgataggaaatatgtcagaacaccaggcacttctgcagttcaat 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1604 agttgcacgcataaagtgataggaaatatgtcagaacaccaggcacttctgcagttcaat 1545
Query: 300 aaacaggtggtaaatytggagatggttcattttttggccgctacaacagcgtcagtgatc 359
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1544 aaacaggtggtaaatctggagatggttcattttttggccgctacaacagcgtcagtgatc 1485
Query: 360 agcatcaatgacaccgacgttcgccatggatctacggtgagcctggtagatttcattaaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1484 agcatcaatgacaccgacgttcgccatggatctacggtgagcctggtagatttcattaaa 1425
Query: 420 tcgttgatcaggcactctaacgtgcaaactccgacactgatggctactacagtctatttg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1424 tcgttgatcaggcactctaacgtgcaaactccgacactgatggctactacagtctatttg 1365
Query: 480 actaaactgagatctattctacctcacgatgtatgcggaatcgaaaccactagacatagg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1364 actaaactgagatctattctacctcacgatgtatgcggaatcgaaaccactagacatagg 1305
Query: 540 atatttatcggatgtttgatccttgcagcaaagaacctgaacgattcttccccattgaat 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1304 atatttatcggatgtttgatccttgcagcaaagaacctgaacgattcttccccattgaat 1245
Query: 600 aaacactggactaattatacagatggtcttttcactttggaggatgtaaataccattgaa 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1244 aaacactggactaattatacagatggtcttttcactttggaggatgtaaataccattgaa 1185
Query: 660 agagaactgctttcgctgtttagttggaacttgaattttagtatgcaggaattggtacag 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1184 agagaactgctttcgctgtttagttggaacttgaattttagtatgcaggaattggtacag 1125
Query: 720 gcactttctcatttcttagtaccgatccaataccagttgagtaccaagaaatcgatacag 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1124 gcactttctcatttcttagtaccgatccaataccagttgagtaccaagaaatcgatacag 1065
Query: 780 aaccaaggtgccaacaaaaattgttcacatctgttattcaacgcaccagtgagtgggcaa 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1064 aaccaaggtgccaacaaaaattgttcacatctgttattcaacgcaccagtgagtgggcaa 1005
Query: 840 acaaaaaatttcctcaatacagaagcgcattcaagggcgtcatctcacatgtcgatcccc 899
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1004 acaaaaaatttcctcaatacagaagcgcattcaaggtcgtcatctcacatgtcgatcccc 945
Query: 900 tctttgtcttcatcgaac 917
||||||||||||||||||
Sbjct: 944 tctttgtcttcatcgaac 927
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,043
Number of Sequences: 1807
Number of extensions: 10043
Number of successful extensions: 1245
Number of sequences better than 1.0e-20: 1
length of query: 917
length of database: 10,358,551
effective HSP length: 16
effective length of query: 901
effective length of database: 10,329,639
effective search space: 9307004739
effective search space used: 9307004739
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)